Andrew - a couple of observations:
wet boards - even with careful drying you may get 'cupping' across the width of all the boards even if carefully stacked. This can be addressed by planing the boards when flat(ish) after drying & before re-installation; as you've got a lot to do buy a half-decent planing machine for the task (sell it afterwards). If you don't do this you'll have great difficulty being able to get the finshed floor flat with a floor sander. Pre-planing then finish sanding is the approach to take. Also your reference to "ends cut on lifting" - don't waste these lengths, just re-cut the tongue & grooves on a router table.
How to fix? Well there was a clue in the original posting: "It was laid on 2 x 2 strapping". Presumably secret nailed. I've posted here before (do some searching via the Search in the Menu bar above) about reclaimed flooring (maple) over concrete, and I'm firmly in the batten (your "strapping") camp, although this should only be considered if you can accommodate an increase (25mm) in the finished floor height. Fix 25mm x 50mm treated timber (tile bats) to the concrete using a Hilty nailer, then secret nail your boards to these bats. Also, with such a large floor area, this method of installation would be the most efficient (quicker).
If you wish to take this approach and want more info then post again.