I have had a closer look at the head of the window. It does now look like what you say. I can just about make out (it's dark in there!) another rebate in the lintel, but close to the outer reveal.
What the joiner has done for these old replacement sashes, is to cut the front, top liner to fit under this rebate. Plus trimming the inner liner to fit under the old inner oak lintel.
These units I want to order are boxed in all round, except for the hardwood cill. I would assume they are more likely to find their way into new builds where the brickwork and lintel area can be made to accommodate the units.
I guess two things concern me, one is that when the units are fitted, the rough stonework behind outer stone surrounds will interfere with the easy fitting of the new windows (I suppose any projecting stones could be trimmed back with an angle-grinder and stone blade)
The other concern is that from the outside the windows will have too much of the side piece showing and start to look out of proportions.
have a look at this pic of the lower window...
View media item 43738 View media item 43740
Certainly the stonework is not absolutely true, the sides are out by a small amount, the lintel is even more out. Plus I think the joiner didn't manage to put in the sash unit square.
The oak lintel on the inside is too low and the old sash was cut down to fit inside.
I guess it's all so wonky, that my second concern is just not really justified....
Finally, I was going to get the fitter to fill the sides and top with foam. Since the sides and top are all boxed in, it would prevent wall debris falling out and secure the unit.