Given that the electrician's proposed solution is "... if this was the case then he would have to put the lights all on one circuit", I can't see what "additional cost" there should be - if anything, connecting two conductors to one MCB in the new CU should take a few seconds less than connecting them to two separate MCBs! ... if he proposes to charge extra for that, he would surely be some sort of cowboy?!The OP's electrician has only highlighted a potential additional cost as any competent electrical contractor would do.
Kind Regards, John